1. Basic Information

Name:BNIP3_HUMAN
Accession#:Q12983
Description:BCL2/adenovirus E1B 19 kDa protein-interacting protein 3
AA Number:194
Sequence:
1
51
101
151
   MSQNGAPGMQ EESLQGSWVE LHFSNNGNGG SVPASVSIYN GDMEKILLDA
QHESGRSSSK SSHCDSPPRS QTPQDTNRAS ETDTHSIGEK NSSQSEEDDI
ERRKEVESIL KKNSDWIWDW SSRPENIPPK EFLFKHPKRT ATLSMRNTSV
MKKGGIFSAE FLKVFLPSLL LSHLLAIGLG IYIGRRLTTS TSTF
*Highlighted peptides (with yellow background) have developed assays.
*Green background amino acids are PTMs.

2. Protein Separation

Sample Preparation: Cells from line 8226 were lysed in RIPA buffer. The equivalent of 50,000 cells were loaded onto an SDS gel. The protein of interest was excised and ingel digestion with trypsin was performed after reduction and alkylation with TCEP and IAA. 1/4 of the resulting digest was then analyzed on a Thermo Scientific TSQ mass spectrometer.

 

3. LC-MS/MS Data

LTTSTSTF

    No LC-MS/MS for this peptide.

SQTPQDTNR

    No LC-MS/MS for this peptide.

4. LC-MRM Screening

Peptides screening: Peptides and transitions for analysis were selected with a peptide predictive program. The results were screened for those with the highest specificity and the most intense transitions.